Wow, interesting stats. If you break it down into broad categories violent crime and property crime, the following stand out on the high side (I’m leaving out the areas I’ve never heard of):

Violent Crime (score > 100)

107 Otay Mesa West
108 Linda Vista
110 Bay Terraces
117 Encanto
119 Lincoln Park
135 Logan Heights
139 San Ysidro
158 Mira Mesa
174 East Village
180 Mountain View
206 North Park
237 Pacific Beach

Property Crime (score > 1000)

1126 La Jolla
1198 Mira Mesa
1269 University City
1373 North Park
1483 Mission Valley East
1534 San Ysidro
1706 Pacific Beach