I did a little experimentation and I’ve noticed starting with windows 8, after some use, I can’t mount the same partition when I’m booted into linux. And if I run the usual tools from linux to fix the NTFS file system, itcan’t… Then when I boot back into windows, it does attempts to do a disk recovery that ends up messing up the partition. That, or I’m going insane…
Are your two SSDs RAIDed or individual? Are you sure you’re not suffering garden-variety data corruption due to a bad SSD, controller, driver, or RAM?
Occam’s Razor — I’d test the hardware thoroughly before trusting the box again.
